Tables index

From

Vaccinomic Approach for Multi Epitopes Vaccine from Glycoprotein D of Virulent Strains of Avian Infectious Laryngotracheitis Virus

Manahel J. Ibrahim, Sumaia A. Ali, Khoubieb A. Abd-elrahman, Yassir A. Almofti

Journal of Applied & Environmental Microbiology. 2020, 8(1), 8-24 doi:10.12691/jaem-8-1-3
  • Table 1. Retrieved sequences of infectious laryngotracheitis virus (ILTV) glycoprotein D with their accession numbers, date and area of collection
  • Table 2. B cell epitopes prediction by different scales of B cell epitopes prediction methods. The start and end of peptides and their length were according to their position in the envelop protein
  • Table 3. List of epitopes and their positions that interacted with different human MHC class I alleles. IC50: Inhibitory concentration needed for binding MHC depending on the IEDB ANN method, the lower is better (# The proposed epitopes as a vaccine candidate)
  • Table 4. List of top four epitopes that bind with high affinity with the human MHC class II alleles. IC50: Inhibitory concentration needed for binding MHC depending on the IEDB NN-aligned method, the lower is better
  • Table 5. Comparison between the numbers of alleles linked with top proposed epitopes in MHCI and MHCII
  • Table 6. The binding energy and Attractive VDW scores for the proposed epitopes with chicken BF2 alleles using PatchDock server